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Read REGENIE results

Source: R/read-regenie.R
read_regenie.Rd

Read REGENIE results

Usage

read_regenie(file, ...)

Arguments

file

Path to a .regenie results file.

...

Additional arguments passed to data.table::fread().

Value

A gwas_data object.

Examples

f <- system.file("extdata", "example_regenie.regenie", package = "ggwas")
gwas <- read_regenie(f)
#> Read 4 variants from example_regenie.regenie
gwas
#> A gwas_data object: 4 variants across 3 chromosomes
#>   Min p-value: 5.20e-08
#>   Lambda GC:   1.438
#>   Columns:     CHR, BP, SNP, P, BETA, SE, A1, A2, AF, N, TEST, CHISQ, EXTRA